The microbial kinetics of the system, including mechanisms such as feedback, inhibition and substrata hydrolysis, are modelled by a mixed set of algebraic and ordinary differential equations which are easily coded into a FACSIMILE input file without the need to use a structured programming language, e.g. FORTRAN. The input file provides FACSIMILE with sufficient conditions to simulate, to a user-defined accuracy, how the solution to the initial conditions varies through time.
The model has been used by UES Software for a number of clients to investigate interactions with other physical/chemical systems. For instance, the model has been coupled to the anaerobic corrosion of steel to determine how the hydrogen generated from this route impinges on the biological system. Other recent applications are the simulation of the start up of high solids content anaerobic digesters and illustrating how the biogas generation from a landfill might be affected by the thermal and chemical shock of incoming ground water with high concentrations of nitrate and sulphate.